fibermagic
0.1.4.post4.dev0+g10bd089
Installation
How to organize your data files
Data Processing Example
Further Analysis
Fibermagic Tutorial
How to analyze big projects
Release History
Minimum Version of Python and NumPy
fibermagic
»
fibermagic Documentation
View page source
fibermagic Documentation
ΒΆ
Installation
Using Fibermagic with Google Colab
Local Installation using Anaconda
How to organize your data files
Why should you care?
How does a data processing pipeline look like?
Where should data be stored?
How to structure your data into directories
How to organize Neurophotometrics data
Keep track of which mouse was connected where
Troubleshoot Neurophotometrics data
Example Datasets
Data Processing Example
A first spike into to investigate the raw data.
Look at eating behavior in the full session
Synchronize photometry recording with behavioral events from video recording
Select appropriate events and calculate perievents
Further Analysis
Fibermagic Tutorial
Fiber Photometry using Neurophotometrics devices
Multiple Colors
Multiple Mice
Investigating a single raw data file
Demodulation of Fiber Photometry Data
Demodulate using airPLS
Analyzing and Synchronizing Behavioral Data
Plot Perievents
How to analyze big projects
Release History
Initial Release (2022-02-23)
Minimum Version of Python and NumPy